Use Cases
Workbench has been used in various different workshops, classes, and environments to provide quick access to runnable app instances with access to real project data for further analysis
Name |
Type |
Description |
Tools |
Status |
|---|---|---|---|---|
IASSIST 2016 Odum Workshop |
Educational Support |
Odum Institute workshop at IASSIST to provide hands-on experience integrating Dataverse with iRODS. |
Dataverse, iRODS Cloudbrowser, iRODS iCAT PostgreSQL, TwoRavens |
Workshop held on May 31, 2016, 27 registered/active users |
NDSC6 Hack Day |
Educational Support |
NDS Docker tutorial |
All Tools |
Workshop held on October 19, 2016, 20 active users |
Phenome 2017 |
Educational Support |
TERRA-REF workshop demonstrating use of custom Jupyter/Rstudio environments to analyze data products. |
Cloud9 Python environment for pyClowder, Docker, File Manager, Hyperspectral/NCO, Jupyter/NetCDF4, Jupyter/PlantCV, JupyterLab for pyClowder, RStudio Geospatial, RStudio Server |
Workshop held on February 10, 2017, 53 registered users 23 active users |
University of Washington iSchool Pilot |
Educational Support |
Application of Labs Workbench as sandbox for iSchool Data Curation curriculum allowing students to launch private instances of data management services such as DSpace, Dataverse, etc. |
CKAN, Dataverse, FIDO, SQL Workbench, Oxygen, EIS Archiver, … |
Spring 2017, INF598H - Advanced Data Curation |
EarthCube |
Data Analysis Tools |
Serve as a resource to increase exposure and allow others to utilize EarthCube Building Blocks software/services. |
CINERGI, SuAVE, GeoDeepDive, OntoSoft, GeoWS, … |
EarthCube 2017 All Hands Meeting, June 7 - June 9 2017 |
PI4 Bootcamp |
Data Analysis Tools |
Used for two-week course on the use and analysis of large and complex data based on the TERRA-REF dataset. |
Jupyter, NetCDF4, PlantCV, OpenRefine, RStudio |
Ran May 26 - June 9, 2017, 30 students participating |
2017 American Einstein Toolkit School + Workshop |
Educational Support |
Used initially for 2-day workshop and evolved into NDS pilot project supporting ongoing access |
Jupyter/Einstein Toolkit |
Ran August 3 - 4 2017, 30 participants. Pilot service used by 40+ users |
ThinkChicago 2017 |
Educational Support |
Three day hackathon exploring novel tools addressing city of chicago data centric challenges. |
Cloud9, Jupyter, RStudio, PHP, MongoDB, Postgres, … |
Ran August 2 - August 4, 2017, 200 participants |
DataDrivenAg 2017 |
Educational Support |
Two-day hackathon as part of workshop on big-data approaches to agricultural research in cooperation with TERRA-REF |
Cloud9, Jupyter, RStudio, Globus Personal Connect, PostgresSQL Studio, and Xpra/OpenBox for desktop apps. Also includes fileserver with over 2TB of sample data, data made available via Geoserver WMS/WCS/WFS, and BETYdb PostGIS database. |
February 26 - February 27, ~80 participants |
TERRA-REF |
Data Analysis Tools |
Labs Workbench platform is being extended to replace current “Tool Launcher” service to enable broader container-based analysis of TERRA-REF data. |
Jupyter, NetCDF4, PlantCV, OpenRefine, RStudio |
Project concluded, Workbench still running and accessible |
Cyber-Human Ecosystem for Engaged Security Education (CHEESE) |
Educational Support |
Workbench instance customized with educational cybersecurity lesson plans |
Jupyter + custom apps based on lesson plan |
Active 2019-2024, Workbench still running and accessible |
Permafrost Discovery Gateway (PDG) Workbench |
Data Analysis Tools |
Platform enabling analysis of permafrost data made available by other parts of the platform using the toolset offered by the Workbench |
All Tools |
Active 2022-present, Workbench still running and accessible |
Metabolomics Workbench |
Data Analysis Tools |
Platform enabling analysis of metabolomic data made available by other parts of the platform using the toolset offered by the Workbench |
All Tools |
Active 2021-present, Workbench still running and accessible |
AMR Dashboard/Workbench |
Data Analysis Tools |
Platform enabling analysis of anti-microbial data made available by other parts of the platform using the toolset offered by the Workbench |
Jupyter, RStudio, … |
Pending |